![](https://secure.gravatar.com/avatar/cad35f4dd77b3ab8e60ede4e3d54c6f4.jpg?s=120&d=mm&r=g)
(a reminder: you *must* send messages to the list from the exact email
address you subscribed with - if not it will reject the posting, even
if the actual server is the same. this happens at least once a
week...)
In any case the .profile solution sounds correct to me, although I
still can't remember what the difference between all of the different
login scripts is.
---------- Forwarded message ----------
From: "Lenin Domínguez"
yes!
On 29 Jan 2013, at 14:55, R.D. Oeffner wrote:
Hi Simon,
Just to be clear; did you actually exectute the alias command before attempting to run phenix.refine?
rob
On Jan 29 2013, Simon Kolstoe wrote:
Hi guys,
I'm just trying to install phenix on a students new macbook pro running OS10.8.2, and want to get phenix.refine working on the command line. I've put in:
alias setphenix="source /Applications/PHENIX-1.8.1-1168/Contents/phenix-1.8.1-1168/phenix_env.sh"
in the .bashrc which seems to execute OK (and already pointed the .bash_profile to .bashrc) however whenever I then type phenix.refine I get command not found. As this is the same setup that I have running on my own machine I am a bit confused as to what is happening!
Thanks!
Simon
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-- Robert Oeffner, Ph.D. Research Associate, The Read Group Department of Haematology, University of Cambridge Cambridge Institute of Medical Research Wellcome Trust / MRC Building, Hills Road, Cambridge, CB2 0XY www-structmed.cimr.cam.ac.uk, tel:01223763234, mobile:07712 887162
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-- Lenin Domínguez-Ramírez Los enemigos fortalecen. Los aliados debilitan. Os digo esto confiando que comprendáis por qué actúo como actúo sabiendo a ciencia cierta que en mi Imperio se acumulan grandes fuerzas con un único deseo: el de destruirme. Quizá vosotros que leéis estas palabras conozcáis bien lo que ocurrió realmente, pero dudo que lleguéis a comprenderlo. - Leto II