Dear Emily, I don't recognise the problem, but you can easily generate such plots yourself. You can extract the residue number and B-factor with grep, cut, etc. and plot the graph with e.g. gnuplot (or a spreadsheet program, or ...). The PDB format is a very nice format for such purposes. Regards, Tim On 06/06/2015 07:12 AM, Emilia C. Arturo (Emily) wrote:
Hello All.
I am trying to zoom in on a section of the B-factors v. residue plot that is generated using the Structure Comparison tool of the phenix GUI. I zoom in by selecting a narrow residue range. When I do so, the plot does not show all parts of each trace; they are broken up and/or residues are missing that are certainly in the pdb files that I supplied, and that showed up when I displayed a wider residue range.
I am using phenix version 1.9-1692 on a Mac (OS X Yosemite). I'd input 21 pdb files. I've done some typical refresher-type things like closed and reopened the project, and restarted phenix (with no rationale, really), but the display problem persists.
Does anyone else recognize this problem?
Regards, Emily.
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