Re: [phenixbb] heavy atom in pdb for refinement

Hi, if you modify your input PDB file according to the example I sent in my previous email, then phenix.refine should work just fine. In this case you should not use elbow at all.

Actually, after I change Zn to ZN, phenix.elbow does not work with the following error message:

Because now elbow "thinks" there is nothing unknown in your input PDB file. Pavel.