Donnie, Coot is not a part of PHENIX and is not distributed with PHENIX. PHENIX can use Coot if it is available (installed separately by the user). Pavel. On 3/10/11 7:26 PM, Donnie Berkholz wrote:
Hi there,
I'd like to average 2Fo-Fc maps from 2 (approximately) isomorphous data sets (one with ligand, one without) to see whether I get better density for some of the noisier bits of the structure. I don't want to do any kind of solvent flattening, histogram matching, cyclical averaging, etc; I just want to sum the equivalent pixels and divide by 2.
Is it possible to do this easily using any of the phenix tools? It seems like all the required plumbing is there with get_cc_mtz_mtz or superpose_maps, but I can't find a phenix utility for averaging two superposed maps. Well, Coot is distributed with phenix so I guess you could call it a
On 17:15 Thu 10 Mar , Stephen Graham wrote: phenix tool. You can use tools in Extensions->Maps to first superpose the maps (transform by LSQ fit), then average them.
_______________________________________________ phenixbb mailing list [email protected] http://phenix-online.org/mailman/listinfo/phenixbb