Hi Edward,
I had a related question- is it possible to have env. variables evaluated in an eff file?
(Like in cns, {===>} parameter_infile_1="CNS_TOPPAR:protein_rep.param";, CNS_TOPPAR is env var)
I'm afraid no.If not, do command line parameters override what is in the eff file? Like:
Yes, whatever is in command-line arguments overrides values in .eff file.I think simple bash/tsch script would be the easiest way to solve the original Andrew's problem.
Best regards,Oleg Sobolev.
On 11/29/2016 05:21 PM, Andrew Morin wrote:
____________________________________________________________Hello,
I am trying to find a convenient way to generate maps using phenix.mtz2map at increasingly greater values of d_min.
For example:
I have a .mtz file of a structure solved at 2.4A. I run phenix.mtz2map with d_min=none and obtain a map using all of the resolution data. I would like to also create 10 more maps with d_min = 3.4, 4.4, 5.4, 6.4,...12.4A.
An mtz of 1.7A would increment at 2.7, 3.7...11.7A, etc.
Might anyone know of a handy way to automate this over a large number of mtz files?
ALTERNATIVELY - I am performing a phenix.cut_out_density step prior to this. So if it might be easier to automate a incrementing high resolution cutoff in phenix.cut_out_density, that would also work.
Thanks for your help.
-Andrew
_________________
phenixbb mailing list
[email protected]
http://phenix-online.org/mailman/listinfo/phenixbb
Unsubscribe: [email protected]rg
_________________
phenixbb mailing list
[email protected]
http://phenix-online.org/mailman/listinfo/phenixbb
Unsubscribe: [email protected]rg
_______________________________________________ phenixbb mailing list [email protected] http://phenix-online.org/mailman/listinfo/phenixbb Unsubscribe: [email protected]