Hi Bryan, If you are still running MIR/SIR, then there are two stages where sites are found or added, in HYSS (heavy-atom search) and in Solve (finding sites by difference Fourier). By using sites_file=one_site.pdb you disable the HYSS search and use the site from one_site.pdb, but the difference fourier step still occurs. For SIR, you can disable this too, with the keyword: ha_iteration=False Let me know if that doesn't do it, All the best, -Tom
dev-572
is there a keyword to disable phaser's weak site search in an autosol run? it seems that using sites=1, max_single_sites=1, sites_file=one_site.pdb isn't doing it.
-Bryan _______________________________________________ phenixbb mailing list [email protected] http://phenix-online.org/mailman/listinfo/phenixbb