hi there,

I've paste to you the bottom of the log file in the previous email.. well I've checked the phenix.solve and phenix.resolve .. they both run..

cheers..


--- On Wed, 11/8/10, Tom Terwilliger <terwilliger@lanl.gov> wrote:

From: Tom Terwilliger <terwilliger@lanl.gov>
Subject: Re: [phenixbb] autosol
To: "PHENIX user mailing list" <phenixbb@phenix-online.org>
Date: Wednesday, 11 August, 2010, 13:27

Hi Ghani,

Try this:
Why do I get "None of the solve versions worked" in AutoSol?

  • If you get this or a similar message for resolve, first have a look at LAST.LOG if it exists in your AutoSol_run_xx_ or AutoBuild_run_xx_ directory. The end of that file may give you a hint as to what was wrong.
  • The next thing to try is running one of these commands (just kill them with control-C if they do run):
    phenix.solve
    or
    phenix.resolve
  • If these load up solve or resolve, then they basically work and the problem is probably in the size of your dataset, some formatting issue, or the like.
  • If they do not run, then the problem is in your system setup. If you are using redhat linux, try changing the option of selinux to selinux=disabled in your /etc/sysconfig/selinux file.

If that doesn't solve the problem, let me know!
All the best,
Tom T


On Aug 11, 2010, at 1:14 PM, Abd Ghani Abd Aziz wrote:

Dear All,

Just been trying to run autosol for SAD data with the new phenix
(1.6.4-486) on ubuntu, but I get an error message:
***********************************************************
Failed to carry out AutoSol_scale_and_analyze_mad:

None of the solve versions worked
**********************************************************************
xtriage appears to run OK, and I get the same error with unmerged or
merged scalepack data.

The same files in 1.6-289 (admittedly on OSX) work fine.

I wonder if there is a known problem with this version of phenix?

Thanks for any suggestions,

Ghani

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Thomas C. Terwilliger
Mail Stop M888
Los Alamos National Laboratory
Los Alamos, NM 87545

Tel:  505-667-0072                 email: terwilliger@LANL.gov
Fax: 505-665-3024                 SOLVE web site: http://solve.lanl.gov
PHENIX web site: http:www.phenix-online.org
ISFI Integrated Center for Structure and Function Innovation web site: http://techcenter.mbi.ucla.edu
TB Structural Genomics Consortium web site: http://www.doe-mbi.ucla.edu/TB
CBSS Center for Bio-Security Science web site: http://www.lanl.gov/cbss





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