Hi Pascal,

what are the selection criteria that can be used to identify those structures in PDB? Any specif keywords in PDB file header? Can it be done (such a selection) in a robust way (with minimum guesses and resulting errors)?

If you can formulate these selection criteria, then I will be able to add it to a future version.

Pavel.

On 4/6/10 1:30 PM, Pascal Egea wrote:

Dear Developers,

I wonder if there would be a simple way to get the Polygon program implemented in Phenix to use only membrane protein deposited structures as the reference data set. I understand that the reference set is much smaller than the whole menagerie of available structures but it represents an homogenous class of protein (crystallized in detergent).

Do you think that this would be meaningful and useful?

Thanks in advance,

--
Pascal F. Egea, PhD
Assistant Professor
UCLA, David Geffen School of Medicine
Department of Biological Chemistry
314 Biomedical Sciences Research Building
office (310)-983-3515
lab (310)-983-3516
email [email protected]
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