hi,
replying for the sake of posterity.
the slow export/reduce seems to be related to a malformed
input model.
the segids are ok but there are some different segids
that have the same chain.
setting the chain to empty for everything resolved the
issue.
Using the malformed chain model took 35 hours (if it
finished).
Using the no chain model took 5 hours.
thanks
jpd
hi,
we
have a large complex at low resolution
(7A) and just want
to
see general conformational changes.
Occasionally phenix
gets
stuck at 'Exporting Results' and top shows
'reduce' running
and
using lots of RAM . so much RAM that it
starts using swap.
is
there a way to bypass or limit the reduce
step.
thanks
jpd
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