Hi!

If I understand the question correctly, in the GUI you can use the tool "Superpose maps" in the maps tab.  It takes 2 models and their associated maps and superimposes them.

All the best,
Tom T


From: [email protected] [[email protected]] on behalf of Pavel Afonine [[email protected]]
Sent: Thursday, July 16, 2015 11:19 AM
To: Mullins, Elwood A.; PHENIX user mailing list
Subject: Re: [phenixbb] Map alignment


Is it possible to align two structures and two maps without moving both to a P1 box?

No, I don't think it is possible.

Pavel