Re: [phenixbb] 2x Postdoc positions and Lab Manager position
The Joyce Laboratory, Henry M. Jackson Foundation supporting the Emerging Infectious Diseases Branch, Walter Reed Army Institute of Research have openings for two postdoctoral positions and a Lab Manager position in Structural Biology of Emerging Infectious Diseases. One postdoctoral position involves the structural and biochemical characterization of small molecule inhibitors against Emerging Infectious pathogens including SARS-CoV-2, as part of an integrated drug development pipeline at WRAIR. One postdoctoral position involves the structural and biochemical characterization of viral glycoproteins from Emerging Infectious pathogens including SARS-CoV-2 to enable vaccine development, antibody therapeutics and small molecule inhibitors. The Lab manager position will oversee day-to-day activities in the lab including lab inventory, ordering and routine mammalian cell culture and transient transfection. These positions offer a unique opportunity to gain extensive structural biology experience focused on vaccine and therapeutic development for pandemic prevention. Interested candidates should apply at the sites indicated below, or with a cover letter and a current CV directly to Gordon Joyce [email protected]mailto:[email protected] Postdoctoral Fellow: https://recruiting.ultipro.com/HEN1006HMJ/JobBoard/3a6861f3-0883-4466-8b7d-3... Postdoctoral Fellow: https://recruiting.ultipro.com/HEN1006HMJ/JobBoard/3a6861f3-0883-4466-8b7d-3... Lab Manager: https://recruiting.ultipro.com/HEN1006HMJ/JobBoard/3a6861f3-0883-4466-8b7d-3... M. Gordon Joyce, Ph.D. Chief, Structural Biology The Henry M. Jackson Foundation for the Advancement of Military Medicine, Inc. (HJF) In support of the Emerging Infectious Diseases Branch (EIDB) and the US Military HIV Research Program (MHRP) Walter Reed Army Institute of Research (WRAIR) 1N33, 503 Robert Grant Ave, Silver Spring, MD 20910 Office: 301-319-7528 Cell: 240-672-4311 https://eidresearch.org/our-team/m-gordon-joyce-phd [email protected]mailto:[email protected] ********************************************************************** This message contains information that may be confidential, privileged, proprietary, or otherwise protected. If you are not the intended recipient, notify the sender immediately and delete/destroy all copies of this message and any attachments. This message is not intended to constitute or include either an electronic record or an electronic signature unless otherwise specifically indicated.
The top of .def files I have from (old?) phenix.refine runs says this: # Command to extract only non-defaults: # phenix.refine --diff-params "cdl_002.def" But I can't get this to work: peano% phenix.refine --diff-params "cdl_002.def" Usage: phenix.refine [options] [reflection_file] [pdb_file] [parameter_file] refine.py: error: no such option: --diff-params Is there a way to get this functionality? ...thx...dac
if you still have have the log file from the run that created that def, there is a list of non-default parameters sandwiched between: #phil __ON__ snd #phil __OFF__ try: awk \$2~/__ON__/,\$2~/__OFF__/ refine_nnn.log > ref.eff or (csh) alias log2eff 'awk \$2~/__ON__/,\$2~/__OFF__/ \!*' log2eff refine_nnn.log > ref.eff of course that will be parameters for that run, so you should increment .output.serial before running! ed On 12/02/2020 09:38 AM, David A Case wrote:
The top of .def files I have from (old?) phenix.refine runs says this:
# Command to extract only non-defaults: # phenix.refine --diff-params "cdl_002.def"
But I can't get this to work:
peano% phenix.refine --diff-params "cdl_002.def" Usage: phenix.refine [options] [reflection_file] [pdb_file] [parameter_file]
refine.py: error: no such option: --diff-params
Is there a way to get this functionality?
...thx...dac
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Hi Dave, thanks for catching and reporting this. It should be --diff_params, not --diff-params. I'll fix this. phenix.refine run with no arguments shows the correct one. Pavel On 12/2/20 06:38, David A Case wrote:
The top of .def files I have from (old?) phenix.refine runs says this:
# Command to extract only non-defaults: # phenix.refine --diff-params "cdl_002.def"
But I can't get this to work:
peano% phenix.refine --diff-params "cdl_002.def" Usage: phenix.refine [options] [reflection_file] [pdb_file] [parameter_file]
refine.py: error: no such option: --diff-params
Is there a way to get this functionality?
...thx...dac
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participants (4)
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David A Case
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Edward A. Berry
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Gordon Joyce
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Pavel Afonine