Reading the documentation is is unclear with queue system will work with Phenix 1.7. qsub is mentioned but not referred as the qsub from Torque/PBS or qsub from Grid Engine. Which qsub are the developers referring to? -- Jeremy Mann [email protected] University of Texas Health Science Center Bioinformatics Core Facility http://www.bioinformatics.uthscsa.edu Phone: (210) 767-3419 ^^^^^^^^ ** NEW OFFICE NUMBER **
Hi Jeremy, It is set up to work with qsub from the Sun Grid Engine. I don't know about Torque/PBS, but it may also work there. Tom T
Reading the documentation is is unclear with queue system will work with Phenix 1.7. qsub is mentioned but not referred as the qsub from Torque/PBS or qsub from Grid Engine. Which qsub are the developers referring to?
-- Jeremy Mann [email protected]
University of Texas Health Science Center Bioinformatics Core Facility http://www.bioinformatics.uthscsa.edu Phone: (210) 767-3419 ^^^^^^^^ ** NEW OFFICE NUMBER **
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Thomas C. Terwilliger wrote:
Hi Jeremy,
It is set up to work with qsub from the Sun Grid Engine. I don't know about Torque/PBS, but it may also work there.
I am happy to report that it is working fine with Torque/PBS and the Maui scheduler. -- Jeremy Mann [email protected] University of Texas Health Science Center Bioinformatics Core Facility http://www.bioinformatics.uthscsa.edu Phone: (210) 767-3419 ^^^^^^^^ ** NEW OFFICE NUMBER **
Jeremy,
I have been successfully using Phenix 1.7 with Rosetta and Torque/PBS. The
qsub command and the example scripts provided by Tom T. on the website have
worked well.
JJ
On Mon, May 16, 2011 at 2:41 PM, Jeremy Mann
Reading the documentation is is unclear with queue system will work with Phenix 1.7. qsub is mentioned but not referred as the qsub from Torque/PBS or qsub from Grid Engine. Which qsub are the developers referring to?
-- Jeremy Mann [email protected]
University of Texas Health Science Center Bioinformatics Core Facility http://www.bioinformatics.uthscsa.edu Phone: (210) 767-3419 ^^^^^^^^ ** NEW OFFICE NUMBER **
_______________________________________________ phenixbb mailing list [email protected] http://phenix-online.org/mailman/listinfo/phenixbb
participants (3)
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Jeremy Mann -
Jermaine Jenkins -
Thomas C. Terwilliger