phenix.composite_omit_map
Dear Phenix list, I have generated an mtz file with phenix.composite_omit_map. It has labels assigned as 2mFo-DFC for F and PH2mFo-DFC for P. Now, I would like to generate a map file. I was trying to convince phenix.maps to use this mtz file to do that, however it didn't seem to like the labels. I tried both the GUI interface of phenix.maps and also tried to force feed it through the command line with a maps.param file. Neither of these worked, so I'm obviously missing something. Btw., Coot can open the mtz file and display the map, and it does look reasonable. This is phenix-1.9-1692 running under RHEL6. Thank you for your help. Fred [32m******************************************************************************* Fred Dyda, Ph.D. Phone:301-402-4496 Laboratory of Molecular Biology Fax: 301-496-0201 DHHS/NIH/NIDDK e-mail:[email protected] Bldg. 5. Room 303 Bethesda, MD 20892-0560 URGENT message e-mail: [email protected] Google maps coords: 39.000597, -77.102102 http://www2.niddk.nih.gov/NIDDKLabs/IntramuralFaculty/DydaFred *******************************************************************************[m
Hi Fred,
I have generated an mtz file with phenix.composite_omit_map.
It has labels assigned as 2mFo-DFC for F and PH2mFo-DFC for P.
Now, I would like to generate a map file.
phenix.mtz2map map_coefficients.mtz will do this. MTZ files contain Fourier map coefficients and the above program will FT them into actual map and output in CCP4 format. This is available in the GUI too.
I was trying to convince phenix.maps to use this mtz file to do that, however it didn't seem to like the labels.
This is meant to take Fobs and model and compute various maps, as described in the documentation. Good luck, Pavel
participants (2)
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Dyda -
Pavel Afonine