mr_rosetta and disulphide bonds
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Hello again, I forgot my important question in all my "this seems to be working but the test says it doesn't"-drama: How do I specify disulphide bonds for MR_rosetta? I know it keeps them if they are in the input model but disulphides are generally poorly conserved, especially in the %identity range where mr_rosetta is the most useful. According to the changelog this feature should be available in the latest dev. Cheers, Morten -- Morten K Grøftehauge, PhD Pohl Group Durham University
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On Mon, Jan 7, 2013 at 6:11 AM, Morten Groftehauge
I forgot my important question in all my "this seems to be working but the test says it doesn't"-drama: How do I specify disulphide bonds for MR_rosetta? I know it keeps them if they are in the input model but disulphides are generally poorly conserved, especially in the %identity range where mr_rosetta is the most useful. According to the changelog this feature should be available in the latest dev.
Maybe something like this? https://www.phenix-online.org/version_docs/dev-1263/mr_rosetta.htm#anch57 -Nat
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Doh! I was looking in the manual for the release version, not the one for
the dev-version. My face is red.
With regard to the test failure am I right in thinking that it's probably
not much of a problem?
Cheers,
Morten
On 7 January 2013 17:08, Nathaniel Echols
I forgot my important question in all my "this seems to be working but
On Mon, Jan 7, 2013 at 6:11 AM, Morten Groftehauge
wrote: the test says it doesn't"-drama: How do I specify disulphide bonds for MR_rosetta? I know it keeps them if they are in the input model but disulphides are generally poorly conserved, especially in the %identity range where mr_rosetta is the most useful. According to the changelog this feature should be available in the latest dev.
Maybe something like this?
https://www.phenix-online.org/version_docs/dev-1263/mr_rosetta.htm#anch57
-Nat _______________________________________________ phenixbb mailing list [email protected] http://phenix-online.org/mailman/listinfo/phenixbb
-- Morten K Grøftehauge, PhD Pohl Group Durham University
participants (2)
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Morten Groftehauge
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Nathaniel Echols