I have solved a structure by MR with Phaser. There are 4 copies of molecules per ASU. Parts of the search model are not agreeable with the new structure leading to messy density in some regions. Now a set of SAD data has been collected. I want to run Autosol (MRSAD) to combine the SAD and model phases, doing density modification including the NCS. Can I run simple_ncs_from_pdb to get the NCS operators from the MR solution pdb file and use them for Autosol? Thanks for help. Huiying UC Irvine
Hi Huiying, If you think that the MR NCS is correct, and the SAD data is the same cell or one that is very close, I would expect this to work fine, yes. Note that autosol should also be able to find the ncs automatically from the anomalously-scattering atoms in your SAD dataset. All the best, Tom T
I have solved a structure by MR with Phaser. There are 4 copies of molecules per ASU. Parts of the search model are not agreeable with the new structure leading to messy density in some regions. Now a set of SAD data has been collected. I want to run Autosol (MRSAD) to combine the SAD and model phases, doing density modification including the NCS.
Can I run simple_ncs_from_pdb to get the NCS operators from the MR solution pdb file and use them for Autosol?
Thanks for help.
Huiying
UC Irvine
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participants (2)
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hli@uci.edu
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Thomas C. Terwilliger