Hi Rahel, There is a command-line version, it's called iotbx.reflection_file_editor. It's a bit complicated to use because you have to define filenames for each input array. We recommend that you use the GUI. If you want to batch process a bunch of reflection files, you might try using the GUI first and looking at the .eff file that is generated to get a sense of how to structure your parameters. To do so, 1) Set up your inputs in the GUI 2) In the menu bar, under "File", select "Save parameter file" The saved parameter file will illustrate how the parameter names are set. -- Billy K. Poon Research Scientist, Molecular Biophysics and Integrated Bioimaging Lawrence Berkeley National Laboratory 1 Cyclotron Road, M/S 33R0345 Berkeley, CA 94720 Tel: (510) 486-5709 Fax: (510) 486-5909 Web: https://phenix-online.org On Mon, Feb 29, 2016 at 3:12 PM, Rahel Woldeyes wrote:

Hi all,

I was wondering if anyone has implemented command line compatible version of phenix.reflection_file_editor .

Thanks!

Rahel

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