Hi, start new PHENIX GUI by typing from the command line: phenix Then click on "Create maps" - that will allow you to compute and output anomalous difference maps in X-plor format. You need to use the latest version for this: http://www.phenix-online.org/download/nightly_builds.cgi Pavel. On 9/29/09 3:48 PM, crystallogrphy wrote:

Hi, I have used anomalous data to do refinement. The crystal diffracts to 3.5A. The resulting mtz file shows good anomalous density around the heavy atoms. Now I want to demonstrate the density in Pymol. Does anyone know how to generate the map use the map file in MTZ format in Pymol?

Thanks! ------------------------------------------------------------------------

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