Thresholding for N/Q/H errors in phenix.refine?
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Hi, For the correction of N/Q/H errors in phenix.refine: is this option binary (that is, can it only be turned on or off)? Or can it be adjusted to be on but its stringency adjusted to an arbitrary scale? https://phenix-online.org/documentation/reference/refinement.html#id19 <--suggests its binary, but asking here for thoroughness. Sincerely, Nicholas Gao
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Hi Nicholas,
For the correction of N/Q/H errors in phenix.refine: is this option binary (that is, can it only be turned on or off)? Or can it be adjusted to be on but its stringency adjusted to an arbitrary scale?
https://phenix-online.org/documentation/reference/refinement.html#id19 <--suggests its binary, but asking here for thoroughness.
it's either on or off as parameter suggests: nqh_flips=True/False. If both, original and flipped result in a clash, no flip happens to that residue. Pavel
participants (2)
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Nicholas Gao
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Pavel Afonine