why does "phenix generate table 1 for journal" plot stats different from those of XSCALE for example?
Hi everyone, I am trying to find out why phenix outputs differnt stats for the high resolution shell than XSCALE does. Anybody has observed this earlier? Best, Almu -- Almudena Ponce-Salvatierra Macromolecular crystallography and Nucleic acid chemistry Max Planck Institute for Biophysical Chemistry Am Fassberg 11 37077 Göttingen Germany
Dear Almudena, did you check the shell is the same? Best, Tim On 09/20/2015 04:02 PM, Almudena Ponce Salvatierra wrote:
Hi everyone,
I am trying to find out why phenix outputs differnt stats for the high resolution shell than XSCALE does.
Anybody has observed this earlier?
Best,
Almu
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-- -- Paul Scherrer Institut Tim Gruene - persoenlich - OFLC/107 CH-5232 Villigen PSI phone: +41 (0)56 310 5754 GPG Key ID = A46BEE1A
Hi Almudena, the shell being not the same is the likeliest reason, indeed! "High resolution shell" doesn't make much sense unless you specify the resolution boundaries that define it (especially when it comes to comparisons!). Different programs may define it differently resulting in different numbers for completeness and other metrics. Even within phenix.refine output you will encounter at least two different definitions. Pavel On 9/20/15 13:49, Tim Gruene wrote:
Dear Almudena,
did you check the shell is the same?
Best, Tim
On 09/20/2015 04:02 PM, Almudena Ponce Salvatierra wrote:
Hi everyone,
I am trying to find out why phenix outputs differnt stats for the high resolution shell than XSCALE does.
Anybody has observed this earlier?
Best,
Almu
_______________________________________________ phenixbb mailing list [email protected] http://phenix-online.org/mailman/listinfo/phenixbb Unsubscribe: [email protected]
_______________________________________________ phenixbb mailing list [email protected] http://phenix-online.org/mailman/listinfo/phenixbb Unsubscribe: [email protected]
participants (3)
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Almudena Ponce Salvatierra -
Pavel Afonine -
Tim Gruene