mac os x installation binary files
Hi Phenix users, I am trying to install phenix in my Mac OS X and after getting the .tar file and running install i get this message (screen shot attached) Could anyone help the newbie? Thanks, Ivan
Hi Ivan, That error message means that the tar file does not match your machine. There are 2 mac tar files; phenix-installer-dev-397-mac-intel-osx.tar phenix-installer-dev-397-mac-ppc-osx.tar It is possible that you need to choose the right one of these to download. The right one is probably "intel" for you. All the best, Tom T On May 7, 2010, at 1:42 PM, xaravich ivan wrote:
Hi Phenix users, I am trying to install phenix in my Mac OS X and after getting the .tar file and running install i get this message (screen shot attached)
Could anyone help the newbie?
Thanks, Ivan
_______________________________________________ phenixbb mailing list [email protected] http://phenix-online.org/mailman/listinfo/phenixbb
Thomas C. Terwilliger Mail Stop M888 Los Alamos National Laboratory Los Alamos, NM 87545 Tel: 505-667-0072 email: [email protected] Fax: 505-665-3024 SOLVE web site: http://solve.lanl.gov PHENIX web site: http:www.phenix-online.org ISFI Integrated Center for Structure and Function Innovation web site: http://techcenter.mbi.ucla.edu TB Structural Genomics Consortium web site: http://www.doe-mbi.ucla.edu/TB CBSS Center for Bio-Security Science web site: http://www.lanl.gov/cbss
Thank you Tom,
It has been resolved.I chose the right mac tar file but I was trying to
install it with mouse clicking.The moment I used the command line it
worked.I do not know if this is a problem!!! Now that I am starting to use
the software for structure solution, I will be visiting this board a lot.
Thanks,
Ivan
On Fri, May 7, 2010 at 12:56 PM, Tom Terwilliger
Hi Ivan,
That error message means that the tar file does not match your machine. There are 2 mac tar files;
phenix-installer-dev-397-mac-intel-osx.tar phenix-installer-dev-397-mac-ppc-osx.tar
It is possible that you need to choose the right one of these to download. The right one is probably "intel" for you. All the best, Tom T
On May 7, 2010, at 1:42 PM, xaravich ivan wrote:
Hi Phenix users, I am trying to install phenix in my Mac OS X and after getting the .tar file and running install i get this message (screen shot attached)
Could anyone help the newbie?
Thanks, Ivan
_______________________________________________ phenixbb mailing list [email protected] http://phenix-online.org/mailman/listinfo/phenixbb Thomas C. Terwilliger Mail Stop M888 Los Alamos National Laboratory Los Alamos, NM 87545
Tel: 505-667-0072 email: [email protected] Fax: 505-665-3024 SOLVE web site: http://solve.lanl.gov PHENIX web site: http:www.phenix-online.org ISFI Integrated Center for Structure and Function Innovation web site: http://techcenter.mbi.ucla.edu TB Structural Genomics Consortium web site: http://www.doe-mbi.ucla.edu/TB CBSS Center for Bio-Security Science web site: http://www.lanl.gov/cbss
_______________________________________________ phenixbb mailing list [email protected] http://phenix-online.org/mailman/listinfo/phenixbb
Thanks everyone,
I just realized that the email is actually going to the list!!!
Thanks,
Ivan
On Fri, May 7, 2010 at 2:04 PM, xaravich ivan
Thank you Tom, It has been resolved.I chose the right mac tar file but I was trying to install it with mouse clicking.The moment I used the command line it worked.I do not know if this is a problem!!! Now that I am starting to use the software for structure solution, I will be visiting this board a lot.
Thanks, Ivan
On Fri, May 7, 2010 at 12:56 PM, Tom Terwilliger
wrote: Hi Ivan,
That error message means that the tar file does not match your machine. There are 2 mac tar files;
phenix-installer-dev-397-mac-intel-osx.tar phenix-installer-dev-397-mac-ppc-osx.tar
It is possible that you need to choose the right one of these to download. The right one is probably "intel" for you. All the best, Tom T
On May 7, 2010, at 1:42 PM, xaravich ivan wrote:
Hi Phenix users, I am trying to install phenix in my Mac OS X and after getting the .tar file and running install i get this message (screen shot attached)
Could anyone help the newbie?
Thanks, Ivan
_______________________________________________ phenixbb mailing list [email protected] http://phenix-online.org/mailman/listinfo/phenixbb Thomas C. Terwilliger Mail Stop M888 Los Alamos National Laboratory Los Alamos, NM 87545
Tel: 505-667-0072 email: [email protected] Fax: 505-665-3024 SOLVE web site: http://solve.lanl.gov PHENIX web site: http:www.phenix-online.org ISFI Integrated Center for Structure and Function Innovation web site: http://techcenter.mbi.ucla.edu TB Structural Genomics Consortium web site: http://www.doe-mbi.ucla.edu/TB CBSS Center for Bio-Security Science web site: http://www.lanl.gov/cbss
_______________________________________________ phenixbb mailing list [email protected] http://phenix-online.org/mailman/listinfo/phenixbb
On Fri, May 7, 2010 at 12:42 PM, xaravich ivan
Hi Phenix users, I am trying to install phenix in my Mac OS X and after getting the .tar file and running install i get this message (screen shot attached)
Please just send us a text dump next time - even the terminal app supports cut-and-paste.
Could anyone help the newbie?
Which installer did you download? Assuming it's the correct one, you probably need to cd into the installer directory so you can run "./install". I'm not certain that this is the problem, but it's the first thing to try. Also, you appear to be trying to install from a non-root account into /usr/local, which you probably don't have write permissions for. You should either run "sudo ./install", or add the "--prefix=" option to install into a directory you control (e.g. "./install --prefix=$HOME/software"). The next version will have additional disk-image based installers for Mac, which will allow you to avoid the command line entirely. (The current installation mechanism will still be possible, of course.) -Nat
Good news, But will it be via Apple's .pkg / installer? I'd rather have a dmg containing an icon/bundle that I can simply drag to the desktop. Installing via .pkg's normally requires admin priv's. F On May 7, 2010, at 2:03 PM, Nathaniel Echols wrote:
The next version will have additional disk-image based installers for Mac, which will allow you to avoid the command line entirely. (The current installation mechanism will still be possible, of course.)
--------------------------------------------- Francis Reyes M.Sc. 215 UCB University of Colorado at Boulder gpg --keyserver pgp.mit.edu --recv-keys 67BA8D5D 8AE2 F2F4 90F7 9640 28BC 686F 78FD 6669 67BA 8D5D
On Fri, May 7, 2010 at 1:11 PM, Francis E Reyes
But will it be via Apple's .pkg / installer? I'd rather have a dmg containing an icon/bundle that I can simply drag to the desktop. Installing via .pkg's normally requires admin priv's.
Just a disk image containing a PHENIX-<version> folder. However, because of the way the installer works, you'll have to put it in /Applications. Making it possible to move it elsewhere is potentially a lot of extra work, unfortunately - this is mostly for the benefit of people who want to run Phenix on their personal MacBooks, not shared systems, and the nightly builds will mostly continue to be command-line only. (I will probably make disk images for testing sometime next week, however.) -Nat
participants (4)
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Francis E Reyes
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Nathaniel Echols
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Tom Terwilliger
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xaravich ivan