On Mon, Jul 22, 2013 at 10:11 AM, Joseph Noel wrote:

Does one have to install both the GUI and command line installers on a Mac if one wants to have the option of running using the command line (for command line only options in nightly builds) and the GUI?

No. If you use the graphical installer, then you can access the command-line tools like this: source /Applications/PHENIX-dev-1435/Contents/phenix-dev-1435/phenix_env.sh (assuming you're using Bash like most Mac users, otherwise remove ".sh" for [t]csh) If you use the command-line installer instead, it should make an iconified launcher for the GUI as well, otherwise the "phenix" command will start that. But I would just use the graphical one; I will investigate modifying this so it is clearer what to do. Which command-line only options do you want to use? Nearly all of these should be in the GUI too - the exception is a few smaller and/or newer utilities which I haven't had time or inclination to add yet. Any feature in the programs which already have a GUI should be in there already, just maybe not so obvious. -Nat