Hi Anna, you can ask phenix.refine produce "kick maps" that are supposed to be less biased, contain less noise and, if you are lucky, might bring some more features (that were buried in noise before). Let me know if you have any questions. Pavel. On 2/23/09 11:40 AM, Anna Gardberg wrote:

Hello.

I am attempting to create an SA-omit composite map with neutron scatterers.

Unfortunately,

phenix.autobuild data= "neutron.mtz" model="neutron_004.pdb" composite_omit_type=sa_omit scattering_table=neutron

results in an error:

"Sorry, unknown file or keyword: scattering_table=neutron Possibilities... (use 'phenix.autobuild --help all' to get full help): general.resolve_pattern_command_list=neutron density_modification.use_resolve_pattern=neutron decision_making.semi_acceptable_r=neutron decision_making.acceptable_r=neutron multiple_models.multiple_models_starting_resolution=neutron "

Can someone here help, please?

(For what it's worth: I'd use nCNS, but while CNS 1.21 (precompiled binaries) works on my computer, CNS 1.1 version seems to compile, it will not run. When I apply the nCNS patch to CNS 1.1, again it seems to compile, but will not run. )

Regards, Anna Gardberg _______________________________________________ phenixbb mailing list [email protected] http://www.phenix-online.org/mailman/listinfo/phenixbb