Cryo_fit2: Fitting to a Cryo-EM Map using Phenix Dynamics

Contents

Note

cryo_fit2 is under active development.

Consider to use cryo_fit1 instead.

Author

Pavel Afonine, Dylan Girodat (dgirodat@lanl.gov), Jignesh Prajapati (jprajapati@lanl.gov), Doo Nam Kim (doonam.kim@gmail.com)

When cryo_fit1 and cryo_fit2 are useful?

See the When cryo_fit1 and cryo_fit2 are useful? in FAQ

When cryo_fit2 is useful?

See the When cryo_fit2 is useful? in FAQ

When cryo_fit2 is more useful than cryo_fit1?

See the When cryo_fit2 is more useful than cryo_fit1? in FAQ

Theory

  • map_weight is cryo-EM map weight and wc is a geometry keeping weight.

How to install

See the installation notes for cryo_fit2

How to Run Cryo_fit2

See the tutorial notes for cryo_fit2

FAQ

See the cryo_fit2 FAQ

Limitation