FAQ

2021 July FAQ - Can I have an angle restraint involving symmetry atoms?
2020 January FAQ - Can I control the automatic linking?
2019 January FAQ - Are the defaults the best for refinements?
2019 July FAQ - Can I submit my X-ray model to the Protein Data Bank in PDB format?
2018 January FAQ - What happens when the Phenix GUI prompts me to send an error report?
2018 July FAQ - How do I model a partially broken disulphide?
2017 July FAQ - What is in the MTZ output by phenix.refine?
2016 January FAQ - Why can't I see the link I want in my model?
2016 July FAQ - Why is the documentation on the website different from what I’m seeing in my installation?
2015 January FAQ - Tips for coordinated metal refinement
2013 January FAQ - I'm seeing a lot of CIF files. Are they all restraints?
2013 July FAQ - After I refine my model, why isn't atom X bound to atom Y when I look at it in a molecular viewer?
2012 January FAQ - What Molprobity score is acceptable?
2012 July FAQ - How can I use semi-emperical quantum chemical methods to optimise the geometry of my ligand?
2011 January FAQ - There are two methods to add links between atoms in PHENIX. Which one should I use?
2011 July FAQ - How do I make composite omit maps in PHENIX?
2010 July FAQ - How do I create restraints for my ligand in PHENIX?