Starting mmtbx.development.electrons on Sun May 19 12:44:31 2024 by afonine =============================================================================== Processing files: ------------------------------------------------------------------------------- Found model, 8ve0_43160.pdb Processing PHIL parameters: ------------------------------------------------------------------------------- No PHIL parameters found Final processed PHIL parameters: ------------------------------------------------------------------------------- data_manager { model { file = "8ve0_43160.pdb" } default_model = "8ve0_43160.pdb" } Starting job =============================================================================== Distribution time : 8s ================================================================================ elec. dist. "ATOM 1 N LYS A 9 .*. N " : -1e "ATOM 9 NZ LYS A 9 .*. N " : -1e "ATOM 110 NZ LYS A 15 .*. N " : -1e "ATOM 166 OD2 ASP A 18 .*. O " : 1e "ATOM 204 NE ARG A 21 .*. N " : -1e "ATOM 398 NE ARG A 34 .*. N " : -1e "ATOM 423 NZ LYS A 35 .*. N " : -1e "ATOM 464 OD2 ASP A 38 .*. O " : 1e "ATOM 476 OD2 ASP A 39 .*. O " : 1e "ATOM 527 OE2 GLU A 42 .*. O " : 1e "ATOM 604 NZ LYS A 48 .*. N " : -1e "ATOM 651 OE2 GLU A 51 .*. O " : 1e "ATOM 684 OE2 GLU A 54 .*. O " : 1e "ATOM 789 OE2 GLU A 61 .*. O " : 1e "ATOM 804 OE2 GLU A 62 .*. O " : 1e "ATOM 819 OE2 GLU A 63 .*. O " : 1e "ATOM 870 OE2 GLU A 66 .*. O " : 1e "ATOM 932 NZ LYS A 70 .*. N " : -1e "ATOM 970 OE2 GLU A 72 .*. O " : 1e "ATOM 1003 OD2 ASP A 74 .*. O " : 1e "ATOM 1030 NZ LYS A 76 .*. N " : -1e "ATOM 1108 NZ LYS A 80 .*. N " : -1e "ATOM 1247 OE2 GLU A 89 .*. O " : 1e "ATOM 1289 OE2 GLU A 92 .*. O " : 1e "ATOM 1393 OD2 ASP A 99 .*. O " : 1e "ATOM 1437 NE ARG A 103 .*. N " : -1e "ATOM 1461 NE ARG A 104 .*. N " : -1e "ATOM 1784 OXT PRO A 125 .*. O " : 1e Validation report Unlikely charge for LYS of -1 " LYS A 9 " =============================================================================== Job complete usr+sys time: 11.06 seconds wall clock time: 11.07 seconds