[cctbxbb] Sphinx documentation

Graeme.Winter at diamond.ac.uk Graeme.Winter at diamond.ac.uk
Mon Jan 21 02:02:08 PST 2013


Hi Folks,

I installed sphinx and tried building the documentation but I got an error:

File ./xfel/xfel.cxi.gfx.rst already exists, skipping.
File ./xfel/xfel.cxi.merging.rst already exists, skipping.
File ./xfel/xfel.cxi.rst already exists, skipping.
File ./xfel/xfel.metrology.rst already exists, skipping.
File ./xfel/xfel.rst already exists, skipping.
File ./xfel/modules.rst already exists, skipping.
sphinx-build -b coverage -d _build/doctrees -D latex_paper_size=a4  . _build/coverage
Making output directory...
Running Sphinx v1.2pre
loading pickled environment... not yet created
building [coverage]: coverage overview
updating environment: 206 added, 0 changed, 0 removed
reading sources... [  0%] cctbx/cctbx                                           
Exception occurred:
  File "/Users/graeme/svn/cctbx/phenix/phenix-dev-1241/build/mac-intel-osx-x86_64/base/Python.framework/Versions/Current/lib/python2.7/site-packages/Sphinx-1.2predev_20130121-py2.7.egg/sphinx/ext/autodoc.py", line 595, in filter_members
    membername in self.options.special_members:
TypeError: argument of type 'object' is not iterable
The full traceback has been saved in /var/folders/j1/cgsqy8fs1lxdyjggcsb3twsw0000gn/T/sphinx-err-jjM5C8.log, if you want to report the issue to the developers.
Please also report this if it was a user error, so that a better error message can be provided next time.
Either send bugs to the mailing list at <http://groups.google.com/group/sphinx-users/>,
or report them in the tracker at <http://bitbucket.org/birkenfeld/sphinx/issues/>. Thanks!
make: *** [coverage] Error 1
cp: ./_build/coverage/python.txt: No such file or directory
cp: ./_build/coverage/c.txt: No such file or directory
sphinx-build -b html -d _build/doctrees -D latex_paper_size=a4  . _build/html
Making output directory...
Running Sphinx v1.2pre
loading pickled environment... not yet created
building [html]: targets for 206 source files that are out of date
updating environment: 206 added, 0 changed, 0 removed
reading sources... [  0%] cctbx/cctbx                                           
Exception occurred:
  File "/Users/graeme/svn/cctbx/phenix/phenix-dev-1241/build/mac-intel-osx-x86_64/base/Python.framework/Versions/Current/lib/python2.7/site-packages/Sphinx-1.2predev_20130121-py2.7.egg/sphinx/ext/autodoc.py", line 595, in filter_members
    membername in self.options.special_members:
TypeError: argument of type 'object' is not iterable
The full traceback has been saved in /var/folders/j1/cgsqy8fs1lxdyjggcsb3twsw0000gn/T/sphinx-err-lONSky.log, if you want to report the issue to the developers.
Please also report this if it was a user error, so that a better error message can be provided next time.
Either send bugs to the mailing list at <http://groups.google.com/group/sphinx-users/>,
or report them in the tracker at <http://bitbucket.org/birkenfeld/sphinx/issues/>. Thanks!
make: *** [html] Error 1

Did I do something wrong? I just grabbed sphinx from the internet. Should I have got it from someplace else?

OS X Lion / svn cctbx.

Thanks,

Graeme
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