[cctbxbb] Build Notes for cctbx on OS X 10.7.5

[Richard Gildea]

Hi James,

Can I ask what version of the cctbx are you attempting to build? For some
time (at least several months) it has been possible to build the cctbx (and
the whole of Phenix) using the default clang on the latest Mac OS X. Most
of the Phenix developers here in Berkeley are now using clang on the latest
OS X, so someone would almost certainly notice immediately if something
wasn't building correctly. The latest "released" build of the cctbx (dating
from May 2012!) does not build with clang as I recall. Unfortunately we do
not have an official release mechanism for the cctbx, beyond Nat deciding
when to mark one of the nightly builds as a release. Clearly the current
"released" version is rather old and we should replace it with a more
recent version. For now I would recommend trying with one of the more
recent nightly builds (e.g.
http://cci.lbl.gov/cctbx_build/show_results.cgi?build_tag=2013_03_22_0005),
or checking the code out directly from svn.

Cheers,

Richard


On 22 March 2013 03:36, Luc Bourhis <luc_j_bourhis at mac.com> wrote:

> Hi James,
>
>
> 1.  The default c++ compiler for OS X 10.7 is actually clang
> (``/usr/bin/c++``).
>     Using clang exposes invalid template code. The first of many errors
> is::
>
>       In file included from
>       /opt/cctbx/cctbx_sources/mmtbx/bulk_solvent/bulk_solvent_ext.cpp:7:
>        /opt/cctbx/cctbx_sources/mmtbx/bulk_solvent/bulk_solvent.h:496:21:
>       error: call to function 'r_factor' that is neither visible in the
> template
>         definition nor found by argument-dependent lookup
>             r.push_back(r_factor(f_obs, f_model.const_ref()));
>
>
> we definitively need to fix that then. I'll give it a go over the weekend.
>
> Best wishes,
>
> Luc
>
>
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>
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