[cctbxbb] compilation issues

Dave Lodowski lodowski at gmail.com
Mon Mar 16 08:56:36 PDT 2015


Hi, sorry if this is a repeat, but an email sent to the cctbx at cci.lbl.gov
bounced back to me. We are attempting to install the DIALS package and
CCTBX is required for compilation. During compilation of CCTBX, Xrender
fails to find the X windows server. OS is Ubuntu LTS 12.04.5

text from console upon failure:

 Installing Xrender...
  log file is /home/dave/cctbx/build/base_tmp/Xrender_install_log
  getting package xrender-0.8.3.tar.gz...
    downloading from http://cci.lbl.gov/cctbx_dependencies : local copy is
current
    using ./xrender-0.8.3.tar.gz (cached)
  installing xrender-0.8.3.tar.gz...
Traceback (most recent call last):
  File "../auto_build/install", line 9, in <module>
    install_base_packages.installer(args=sys.argv, log=sys.stdout)
  File "../auto_build/install_base_packages.py", line 161, in __init__
    self.build_dependencies(packages=packages)
  File "../auto_build/install_base_packages.py", line 505, in
build_dependencies
    getattr(self, 'build_%s'%i)()
  File "../auto_build/install_base_packages.py", line 781, in build_render
    self.build_compiled_package_simple(pkg_name=pkg, pkg_name_label=name)
  File "../auto_build/install_base_packages.py", line 407, in
build_compiled_package_simple
    log=pkg_log)
  File "../auto_build/install_base_packages.py", line 392, in
configure_and_build
    self.call("./configure %s" % " ".join(list(config_args)), log=log)
  File "../auto_build/install_base_packages.py", line 243, in call
    return call(args, log=log, verbose=self.verbose, **kwargs)
  File "../auto_build/installer_utils.py", line 71, in call
    raise RuntimeError("Call to '%s' failed with exit code %d" % (args, rc))
RuntimeError: Call to './configure --prefix="/home/dave/cctbx/build/base"'
failed with exit code 1

​Log file indicates everything fine till X is required then :​
checking for X... no
configure: error: X is required, but it was either disabled or not found.

​any suggestions as to how to proceed would be appreciated
thanks,
--David Lodowski
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