[cctbxbb] CCTBX.XFEL problems with synchrotron stills

pinin pinins at gmail.com
Tue Apr 5 01:59:09 PDT 2016


MAybe this paper can help you to start you processing:
http://journals.iucr.org/d/issues/2015/05/00/kw5115/stdsup.html

Cheers

2016-04-05 10:55 GMT+02:00 Schulz, Eike-Christian <eike.schulz at mpsd.mpg.de>:
> Dear all,
>
> I am new to serial crystallography and trying to process still images from a synchrotron source (Pilatus 6M detector) using CCTBX. Obviously the process is not glitch-free and I was hoping to get some help here.
>
> The indexing routine starts, indexes the images correctly and and produces a log file but no .pickle files are created in the results/000/ directory as described in the wiki entry.
>
> I assume that there is a software module that is not properly loaded during the process since I get following error message during indexing:
>
> ---------BEGIN Integrate one frame 75 warsaw0048_00075.pickle
> EFFECTIVE TILING 0 0 2282 2282
> Indexing error: No module named cxi_user
>
>
> Is there a way to find out if all dependencies are matched ? I suppose CCTBX.XFEL depends on some (specific) python libraries … ?
>
> Or am I completely wrong and the error is something different ?
>
> With best regards
>
> Eike
>
>
>
>
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-- 
Gianluca Santoni, PhD



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