[cctbxbb] incorrect url for downloading fasta files
nwmoriarty at lbl.gov
Wed Jun 28 07:42:43 PDT 2017
Thanks Rob. Seems like a test for this is difficult.
Nigel W. Moriarty
Building 33R0349, Molecular Biophysics and Integrated Bioimaging
Lawrence Berkeley National Laboratory
Berkeley, CA 94720-8235
Phone : 510-486-5709 Email : NWMoriarty at LBL.gov
Fax : 510-486-5909 Web : CCI.LBL.gov
On Wed, Jun 28, 2017 at 7:06 AM, R.D. Oeffner <rdo20 at cam.ac.uk> wrote:
> It would appear that the URL in cctbx_project\iotbx\pdb\fetch.py for
> fetching fasta files has been changed by RCSB. So fetch.py therefore
> downloads garbage when trying to download a fasta file. The correct URL is
> not documented by RCSB but can be inferred from the RCSB web site when
> downloading a fasta file. I've updated the URL in fetch.py accordingly.
> Robert Oeffner, Ph.D.
> Research Associate, The Read Group
> Department of Haematology,
> Cambridge Institute for Medical Research
> University of Cambridge
> Cambridge Biomedical Campus
> Wellcome Trust/MRC Building
> Hills Road
> Cambridge CB2 0XY
> tel: +44(0)1223 763234 <+44%201223%20763234>
> cctbxbb mailing list
> cctbxbb at phenix-online.org
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