[cctbxbb] Booststrap fails: zlib.h missing on Mojave with Xcode 10.3

Luc Bourhis luc_j_bourhis at mac.com
Tue Aug 13 06:40:53 PDT 2019


Ok, not at OpenSSL install but after. Line 800 of auto_build/install_base_packages.py is 

    if self.flag_is_mac and not op.exists('/usr/include/zlib.h'):

I am afraid /usr/include has disappeared on Mojave!  

> On 13 Aug 2019, at 15:28, Luc Bourhis <luc_j_bourhis at mac.com> wrote:
> 
> Hi,
> 
> I am trying to setup a Python 3 cctbx. I did
> 
> python bootstrap.py --git-ssh --python3 --builder cctbxlite
> 
> But it fails at the installation of OpenSSL. Clang version is "Apple LLVM version 10.0.1 (clang-1001.0.46.4)”. I attached the OpenSSL install log but I don’t see any error in it. And the advice to run xcode-select is bogus: I have it already setup. 
> Best wishes,
> 
> Luc
> 
> Installing OpenSSL...
>   log file is /Users/luc/Developer/cctbx/base_tmp/OpenSSL_install_log
>   getting package openssl-1.0.2r.tar.gz...
>     downloading from https://gitcdn.link/repo/dials/dependencies/master/openssl-1.0.2r.tar.gz <https://gitcdn.link/repo/dials/dependencies/master/openssl-1.0.2r.tar.gz> : 5223 kB
>   installing openssl-1.0.2r.tar.gz...
>   package openssl took 219.5s to install
> 
> --------------------------------------------------------------------------------
> 
> zlib.h missing -- try running 'xcode-select --install' first
> Process failed with return code 1
> 
> 
> <OpenSSL_install_log>

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