[cctbxbb] interactive cctbx.python backspace behavior (on linux)

Billy Poon BKPoon at lbl.gov
Fri Aug 23 18:22:01 PDT 2019


Hi Wolfram

Sorry, step 3 should be,

3) python modules/cctbx_project/libtbx/auto_build/bootstrap.py base
--use-conda

You do not need the --builder argument.

--
Billy K. Poon
Research Scientist, Molecular Biophysics and Integrated Bioimaging
Lawrence Berkeley National Laboratory
1 Cyclotron Road, M/S 33R0345
Berkeley, CA 94720
Tel: (510) 486-5709
Fax: (510) 486-5909
Web: https://phenix-online.org


On Fri, Aug 23, 2019 at 6:21 PM Billy Poon <BKPoon at lbl.gov> wrote:

> Hi Wolfram,
>
> Sorry for the issue, are you using a recent build of CCTBX? Can you try
> these steps?
>
> 1) cd <CCTBX directory>
> 2) rm -fr conda_base
> 3) python modules/cctbx_project/libtbx/auto_build/bootstrap.py base
> --builder=phenix --use-conda
>
> It basically recreates the dependencies directory. It's using conda, so it
> should take less than 5 minutes. If you are using conda, you will need
> conda version 4.4 or greater.
>
> Let me know if that doesn't solve the problem. Thanks!
>
> --
> Billy K. Poon
> Research Scientist, Molecular Biophysics and Integrated Bioimaging
> Lawrence Berkeley National Laboratory
> 1 Cyclotron Road, M/S 33R0345
> Berkeley, CA 94720
> Tel: (510) 486-5709
> Fax: (510) 486-5909
> Web: https://phenix-online.org
>
>
> On Fri, Aug 23, 2019 at 12:55 PM wtempel <wtempel at gmail.com> wrote:
>
>> Hi,
>> Currently, cctbx.python behaves like described in this stackoverflow post:
>>
>> https://stackoverflow.com/questions/893053/seeing-escape-characters-when-pressing-the-arrow-keys-in-python-shell.
>> I am missing the convenience of backspace delete, which is available on
>> /usr/bin/python interactive sessions. Could that feature be added during
>> compilation of the pre-built cctbx distributions?
>> Regards.
>> Wolfram Tempel
>> _______________________________________________
>> cctbxbb mailing list
>> cctbxbb at phenix-online.org
>> http://phenix-online.org/mailman/listinfo/cctbxbb
>>
>
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