P 2 3
j, i, h, g, f, e, d, c, b, a,
I a -3 d
h, g, f, e, d, c, b, a,
I 4/m c m (a+b-1/6,-a+b,c+1/4)
m, l, k, j, i, h, g, f, e, d, c, b, a,
u+s,u,s: 0.62 0.33 0.30

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\regression\tst_sgtbx_site_constraints.py
Skipping process_zeolite_atlas(): input file not available
u+s,u,s: 0.69 0.33 0.36

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\regression\tst_reflection_statistics.py
OK

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\regression\tst_sgtbx_harker.py
OK

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\regression\tst_twin_target.py
u+s,u,s: 42.98 42.62 0.36

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\sgtbx\symbol_confidence.py
OK

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\sgtbx\bravais_types.py
OK

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\regression\tst_miller_lookup_utils.py
OK

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\regression\tst_crystal.py I41/acd
I 41/a c d :2
u+s,u,s: 0.56 0.33 0.23

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\regression\tst_direct_space_asu.py I41/acd
I 41/a c d :2
u+s,u,s: 3.87 3.53 0.34

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\regression\tst_pair_asu_table.py
Skipping exercise_all(): phenix_regression/misc not available
u+s,u,s: 0.61 0.33 0.28

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\regression\tst_crystal_asu_clusters.py
OK

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\regression\tst_coordination_sequences.py
Skipping exercise(): input file not available
OK

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\regression\tst_crystal_close_packing.py R-3mr
time groel_sampling: 1.20 seconds
R -3 m :R
u+s,u,s: 2.40 2.04 0.36
OK

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\regression\tst_xray.py I41/acd
I 41/a c d :2
u+s,u,s: 7.85 7.50 0.34

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\regression\tst_structure_factors_multithread.py
OpenMP not available: test of resilience to adptbx exception skipped.
omptbx.have_stubs_h
Skipping raw multithreaded structure factor computation tests
usr+sys time: 0.70 seconds
wall clock time: 0.70 seconds

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\regression\tst_miller.py P31
P 31
u+s,u,s: 7.24 6.74 0.50
OK

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\regression\tst_reciprocal_space_asu.py P312
P 3 1 2
u+s,u,s: 0.53 0.28 0.25

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\regression\tst_triplet_generator.py P41
P 41
u+s,u,s: 0.58 0.30 0.28

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\regression\tst_emma.py P31
P 31
u+s,u,s: 1.47 1.15 0.31

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\regression\tst_find_centre_of_inversion.py P31
P 31
u+s,u,s: 0.56 0.30 0.27

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\regression\tst_expand_to_p1.py P31
P 31
u+s,u,s: 0.56 0.25 0.31

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\regression\tst_change_basis.py P31
P 31
u+s,u,s: 0.61 0.36 0.25

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\regression\tst_wilson_plot.py P31
P 31
u+s,u,s: 0.75 0.48 0.27

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\regression\tst_xray_derivatives.py P31
P 31
u+s,u,s: 3.95 3.54 0.41

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\regression\tst_xray_fast_gradients.py P31
P 31
from_scatterers_direct:  4 calls, 0.06 s
from_scatterers_fft:    15 calls, 0.27 s
gradients_direct:       23 calls, 0.53 s
gradients_fft:           2 calls, 0.11 s
usr+sys time: 2.96 seconds
wall clock time: 3.00 seconds

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\regression\tst_xray_minimization.py --F P31
Refinement against F
P 31
u+s,u,s: 14.41 14.04 0.37

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\regression\tst_xray_minimization.py --F_sq P31
Refinement against F^2
P 31
u+s,u,s: 5.63 5.37 0.27

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\maptbx\tst_real_space_refinement.py
u+s,u,s: 4.45 4.04 0.41

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\regression\tst_maptbx_structure_factors.py P31
P 31
u+s,u,s: 0.67 0.41 0.27

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\maptbx\tst_real_space_refinement_simple.py
u+s,u,s: 1.59 1.37 0.22

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\maptbx\tst_real_space_target_and_gradients.py
Start: 0.8
Final: 8.73417576503e-05
Final: 8.73417576504e-05
Final: 8.73417576504e-05
Final: 8.73417576505e-05
Final: 8.73417576506e-05
OK
Time:    8.611

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\regression\tst_miller_merge_equivalents.py P31
P 31
u+s,u,s: 0.58 0.27 0.31
OK

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\regression\tst_grouped_data.py P31
P 31
u+s,u,s: 0.55 0.19 0.36
OK

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\regression\tst_miller_fft_map.py P31
P 31
u+s,u,s: 1.12 0.83 0.30

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\regression\tst_sampled_model_density.py P31
P 31
usr+sys time: 2.48 seconds
wall clock time: 2.48 seconds

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\regression\tst_fast_nv1995.py F222
F 2 2 2
u+s,u,s: 0.78 0.39 0.39

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\regression\tst_geometry_restraints.py
OK

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\regression\tst_geometry_restraints_lbfgs.py
OK

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\regression\tst_geometry_restraints_2.py
  File "c:\Users\MOHAMM~1.LAC\Desktop\cctbx_sources\cctbx\regression\tst_geometr
y_restraints_2.py", line 1
    Python 2.6.6 |EPD 6.3-1 (32-bit)| (r266:84292, Sep 20 2010, 11:26:16) [MSC v
.1500 32 bit (Intel)] on win32
             ^
SyntaxError: invalid syntax

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\development\make_cns_input.py P31
P 31
u+s,u,s: 0.55 0.17 0.37

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\development\tst_cns_epsilon.py P31
CNS not available.

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\development\tst_cns_hl.py P31
CNS not available.

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\development\run_shelx.py P31
SHELX not available.

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\regression\tst_pointgroup_tools.py
OK

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\sgtbx\sub_lattice_tools.py
u+s,u,s: 1.12 0.86 0.27

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\sgtbx\rational_matrices_point_groups.py
OK

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\sgtbx\cosets.py
OK

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\sgtbx\reticular_pg_tools.py
OK

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\sgtbx\reticular_twin_laws.py
OK

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\regression\tst_find_best_cell.py
OK

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\regression\tst_amplitude_normalisation.py
OK

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\regression\tst_statistics_graphs.py
P 1
P -1
P 1 2 1
C 1 2/c 1
P 2 2 2
I m m a
P 4
P 41
I 41/a c d :2
P 3
P 31
P 3 1 m
R -3 c :H
P 6
P 63/m m c
P 2 3
I a -3 d
I 4/m c m (a+b-1/6,-a+b,c+1/4)
u+s,u,s: 3.53 3.20 0.33
OK

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\sgtbx\direct_space_asu\proto\tst_asu.py
u+s,u,s: 7.71 7.44 0.27

c:\Users\MOHAMM~1.LAC\Desktop\Enthought\python.exe c:\Users\MOHAMM~1.LAC\Desktop
\cctbx_sources\cctbx\masks\tests\tst_flood_fill.py
OK


c:\Users\Mohammed M. Lach-hab\Desktop\cctbx_build>