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<p class="MsoNormal">Dials west is currently observing test failures on Mac related to Boost.
<o:p></o:p></p>
<p class="MsoNormal">To exclude any errors on our side I have run things twice clean from bootstrap:<o:p></o:p></p>
<p class="MsoNormal">One of a number of affected tests:<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">libtbx.python cctbx/xray/boost_python/tst_xray.py<o:p></o:p></p>
<p class="MsoNormal"><b><o:p> </o:p></b></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Courier New";mso-fareast-language:EN-GB">show_stack(1): /Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/cctbx_project/cctbx/xray/boost_python/tst_xray.py(381)
exercise_conversions<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Courier New";mso-fareast-language:EN-GB">show_stack(2): /Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/cctbx_project/cctbx/xray/boost_python/tst_xray.py(1993)
run<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Courier New";mso-fareast-language:EN-GB">show_stack(3): /Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/cctbx_project/cctbx/xray/boost_python/tst_xray.py(2009)
<module><o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Courier New";mso-fareast-language:EN-GB">libc backtrace (29 frames, most recent call last):<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Courier New";mso-fareast-language:EN-GB">
</span><span lang="DE" style="font-size:10.0pt;font-family:"Courier New";mso-fareast-language:EN-GB">30 Python 0x0000000100000d71 Python + 3441<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="DE" style="font-size:10.0pt;font-family:"Courier New";mso-fareast-language:EN-GB"> 29 Python 0x0000000100000e58 Python + 3672<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="DE" style="font-size:10.0pt;font-family:"Courier New";mso-fareast-language:EN-GB">
</span><span style="font-size:10.0pt;font-family:"Courier New";mso-fareast-language:EN-GB">28 Python 0x00000001000ef06f Py_Main + 3135<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Courier New";mso-fareast-language:EN-GB"> 27 Python 0x00000001000d78be PyRun_SimpleFileExFlags + 702<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Courier New";mso-fareast-language:EN-GB"> 26 Python 0x00000001000d7d84 PyRun_FileExFlags + 164<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Courier New";mso-fareast-language:EN-GB"> 25 Python 0x00000001000aea06 PyEval_EvalCode + 54<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Courier New";mso-fareast-language:EN-GB"> 24 Python 0x00000001000af244 PyEval_EvalCodeEx + 2100<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Courier New";mso-fareast-language:EN-GB"> 23 Python 0x00000001000b25c8 PyEval_EvalFrameEx + 12280<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Courier New";mso-fareast-language:EN-GB"> 22 Python 0x00000001000b6ab6 fast_function + 118<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Courier New";mso-fareast-language:EN-GB"> 21 Python 0x00000001000af244 PyEval_EvalCodeEx + 2100<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Courier New";mso-fareast-language:EN-GB"> 20 Python 0x00000001000b25c8 PyEval_EvalFrameEx + 12280<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Courier New";mso-fareast-language:EN-GB"> 19 Python 0x00000001000b6ab6 fast_function + 118<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Courier New";mso-fareast-language:EN-GB"> 18 Python 0x00000001000af244 PyEval_EvalCodeEx + 2100<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Courier New";mso-fareast-language:EN-GB"> 17 Python 0x00000001000b4198 PyEval_EvalFrameEx + 19400<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Courier New";mso-fareast-language:EN-GB"> 16 Python 0x0000000100011023 PyObject_Call + 99<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Courier New";mso-fareast-language:EN-GB"> 15 Python 0x000000010006ad8b type_call + 347<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Courier New";mso-fareast-language:EN-GB"> 14 Python 0x00000001000708af slot_tp_init + 175<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Courier New";mso-fareast-language:EN-GB"> 13 Python 0x0000000100011023 PyObject_Call + 99<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Courier New";mso-fareast-language:EN-GB"> 12 Python 0x000000010001f0d8 instancemethod_call + 232<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Courier New";mso-fareast-language:EN-GB"> 11 Python 0x0000000100011023 PyObject_Call + 99<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Courier New";mso-fareast-language:EN-GB"> 10 libboost_python.dylib 0x0000000101888663 boost::python::objects::function_call(_object*, _object*, _object*) + 83<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Courier New";mso-fareast-language:EN-GB"> 9 libboost_python.dylib 0x000000010188ce71 boost::python::handle_exception_impl(boost::function0<void>) + 81<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Courier New";mso-fareast-language:EN-GB"> 8 libboost_python.dylib 0x00000001018889ca boost::detail::function::void_function_ref_invoker0<boost::python::objects::(anonymous namespace)::bind_return,
void>::invoke(boost::detail::function::function_buffer&) + 26<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Courier New";mso-fareast-language:EN-GB"> 7 libboost_python.dylib 0x000000010188693a boost::python::objects::function::call(_object*, _object*) const + 874<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Courier New";mso-fareast-language:EN-GB"> 6 cctbx_xray_ext.so 0x0000000107c8e1c5 boost::python::detail::caller_arity<3u>::impl<void (*)(_object*, scitbx::af::const_ref<double,
scitbx::af::trivial_accessor> const&, scitbx::af::const_ref<double, scitbx::af::trivial_accessor> const&), boost::python::default_call_policies, boost::mpl::vector4<void, _object*, scitbx::af::const_ref<double, scitbx::af::trivial_accessor> const&, scitbx::af::const_ref<double,
scitbx::af::trivial_accessor> const&> >::operator()(_object*, _object*) + 229<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Courier New";mso-fareast-language:EN-GB"> 5 cctbx_xray_ext.so 0x0000000107c91f44 boost::python::objects::make_holder<2>::apply<boost::python::objects::value_holder<cctbx::xray::array_f_sq_as_f<cctbx::xray::f_sq_as_f_xtal_3_7,
double> >, boost::mpl::joint_view<boost::python::detail::drop1<boost::python::detail::type_list<scitbx::af::const_ref<double, scitbx::af::trivial_accessor> const&, scitbx::af::const_ref<double, scitbx::af::trivial_accessor> const&, boost::python::optional<double
const&, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_>, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_,
mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >, boost::python::optional<double const&, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_,
mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> > >::execute(_object*, scitbx::af::const_ref<double, scitbx::af::trivial_accessor> const&, scitbx::af::const_ref<double, scitbx::af::trivial_accessor> const&) + 100<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Courier New";mso-fareast-language:EN-GB"> 4 ??? 0x0000000000000002 0x0 + 2<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Courier New";mso-fareast-language:EN-GB"> 3 libsystem_platform.dylib 0x00007fff8caabeaa _sigtramp + 26<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Courier New";mso-fareast-language:EN-GB"> 2 boost_python_meta_ext.so 0x0000000101841370 initboost_python_meta_ext + 0<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Courier New";mso-fareast-language:EN-GB">Floating-point error (Python and libc call stacks above)<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Courier New";mso-fareast-language:EN-GB"> This crash may be due to a problem in any imported<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Courier New";mso-fareast-language:EN-GB"> Python module, including modules which are not part<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Courier New";mso-fareast-language:EN-GB"> of the cctbx project. To disable the traps leading<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Courier New";mso-fareast-language:EN-GB"> to this message, define these environment variables<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Courier New";mso-fareast-language:EN-GB"> (e.g. assign the value 1):<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Courier New";mso-fareast-language:EN-GB"> BOOST_ADAPTBX_FPE_DEFAULT<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Courier New";mso-fareast-language:EN-GB"> BOOST_ADAPTBX_SIGNALS_DEFAULT<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Courier New";mso-fareast-language:EN-GB"> This will NOT solve the problem, just mask it, but<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Courier New";mso-fareast-language:EN-GB"> may allow you to proceed in case it is not critical.<o:p></o:p></span></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">Any ideas?<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">Best wishes,<o:p></o:p></p>
<p class="MsoNormal">-Markus<o:p></o:p></p>
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