[phenixbb] link in a double conformation residue

mvliberato at ursa.ifsc.usp.br mvliberato at ursa.ifsc.usp.br
Fri Sep 12 05:49:40 PDT 2008


Hi Ralf,

sorry for delay with the replay. The commands worked very well.
It helps me a lot!!
Thank you very much!!

Marcelo


Quoting "Ralf W. Grosse-Kunstleve" <rwgk at cci.lbl.gov>:

> Hi Marcelo,
>
>> I'm refining a protein structure with a cysteine covalently bonded 
>> with a fatty
>> acid. However, this cysteine has a double conformation.
>> I try to make a link with "cif_link.params", but I don't know how to 
>> describe
>> the double conformation.
>> How can I make this link between the fatty acid oxigen and the sulfur of the
>> cysteine in one of the conformations?
>
> You can use e.g. "altloc A" and "altloc B" to distinguish the conformers.
> Let me know if this doesn't help.
>
> Ralf
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