[phenixbb] maps and autobuild
cbose0001 at gmail.com
Mon Apr 6 08:55:58 PDT 2009
I am a first time user to phenix , and I have just completed the autobuild
My question may have been asked many times before, but..
The output after the cycles of autobuild/refinement gave me a refined file
for a 2.2 Angstrom data set with an R/Rfree of .28/.32.
I want to take a look at the density modified maps and see what I can adjust
further, but am having trouble loading it in coot.
Am I correct in understanding that Coot can load and construct 2f0-fc maps?
if so How? :
Also from reading the manual, as I understand it, the phenix.refine command
will automatically generate Coot compatible maps.
But if I take my autobuild.pdb file and the original mtz data file, how can
I quickly obtain the same R/Rfree, what commands would I have to imput other
than phenix.refine mtz pbd?
Also, is it possible to make 3Fo-2Fc maps?
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