[phenixbb] density fit analysis in coot
Paul Emsley
paul.emsley at bioch.ox.ac.uk
Mon Jun 22 12:03:54 PDT 2009
Raja Dey wrote:
> Dear Friends,
> Can anyone tell what the number popping up against every bar of the density fit analysis histogram in COOT is? Is it a correlation co-eff between Fo and Fc or something else? I am interested to know how is this parameter calculated.
>
Is is the average electron density at the atom centres of the atoms in
the residue.
> Is it possible to build a model in COOT if only the electron density map and sequence is given?
If it is traceable, yes.
> Although I know there are some programs to create an initial model. I am wondering whether COOT can do that.
>
With your input, yes: Baton-building.
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