[phenixbb] twinned kick maps?

Petri Kursula petri.kursula at oulu.fi
Fri Mar 27 15:19:45 PDT 2009


Just wondering, after some nice experience with kicked maps from a  
'normal' case, I tried to get kicked maps for a twinned structure, and  
get the following...is this a known issue, is it possible to calculate  
kicked maps for a twinned refinement?

Traceback (most recent call last):
   File "/Users/pkursula/cci-apps/cci_apps_sources/phenix/phenix/ 
command_line/refine.py", line 5, in <module>
     command_line.run(command_name="phenix.refine", args=sys.argv[1:])
   File "/Users/pkursula/cci-apps/cci_apps_sources/phenix/phenix/ 
refinement/command_line.py", line 101, in run
     map_manger.write_files()
   File "/Users/pkursula/cci-apps/cci_apps_sources/phenix/phenix/ 
refinement/driver.py", line 1256, in write_files
     symmetry_flags                = maptbx.use_space_group_symmetry)
   File "/Users/pkursula/cci-apps/cci_apps_sources/mmtbx/maps.py",  
line 473, in __init__
     b_sharp                       = b_sharp).fft_map
   File "/Users/pkursula/cci-apps/cci_apps_sources/mmtbx/maps.py",  
line 498, in __init__
     r_free_flags   = fmodel.r_free_flags,
AttributeError: 'twin_model_manager' object has no attribute  
'r_free_flags'
bash-3.2$

Best regards,
Petri



---
Petri Kursula, Ph.D.
Academy Research Fellow, Group Leader
Docent of Neurobiochemistry
Department of Biochemistry
University of Oulu, Oulu, Finland
petri.kursula at oulu.fi
cc.oulu.fi/~pkursula
www.biochem.oulu.fi/kursula
---




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