[phenixbb] Autobuild error

[Tom Terwilliger]

Hi Katya,
I'm sorry for the trouble!  Can you first check to make sure you have  
a recent version of phenix (i.e., in the last few months). There was  
an earlier version that sometimes had this problem but I think that it  
should not be happening now.  If not, can you download a current  
nightly build (take one from a few days ago to be safe) and try again?
If that does not do it, then if you could email me a listing of the  
autoBuild directories with "ls -lR" and send me the AutoBuild_run_1_/ 
AutoBuild_run_1_1.log file that would be most helpful.
All the best,
Tom T

Thomas C. Terwilliger
Mail Stop M888
Los Alamos National Laboratory
Los Alamos, NM 87545

Tel:  505-667-0072                 email: terwilliger at LANL.gov
Fax: 505-665-3024                 SOLVE web site: http://solve.lanl.gov
PHENIX web site: http:www.phenix-online.org
ISFI Integrated Center for Structure and Function Innovation web site: http://techcenter.mbi.ucla.edu
TB Structural Genomics Consortium web site: http://www.doe-mbi.ucla.edu/TB
CBSS Center for Bio-Security Science web site: http://www.lanl.gov/cbss




On May 20, 2009, at 11:51 AM, Katya Heldwein wrote:

> Hi, I am trying to run Autobuild to generate a very good rebuilt  
> model using
>
> phenix.autobuild data=data.mtz model=coords.pdb multiple_models=True \
>  include_input_model=True  \
>  multiple_models_number=1 n_cycle_rebuild_max=5
>
> with some modifications.
>
> When I run it, I get the following error:
>
> ********************************************************************************
> Failed to carry out AutoBuild_multiple_models:
>
> [Errno 2] No such file or directory: 'AutoBuild_run_1_/TEMP0/ 
> temporary.com'
> ********************************************************************************
>
> How can I troubleshoot this problem?
>
> Katya
>
>
> -- 
> Ekaterina Heldwein, Ph.D.
> Assistant Professor
> Department of Molecular Biology and Microbiology
> Tufts University 136 Harrison Ave
> Boston, MA 02111
>
> phone: 617-636-0858
> fax: 617-636-0337
> e-mail: katya.heldwein at tufts.edu
>
>
>
>
>
>
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