[phenixbb] Failed to carry out AutoBuild_build_cycle: Word too long.
Thomas C. Terwilliger
terwilliger at lanl.gov
Thu May 28 05:43:10 PDT 2009
Hi Gino,
Yes, this seems to happen if your PATH is really long. I have not been
able to solve the problem in general, but try this:
echo $PATH
and I am guessing it will be about a page long. See if you can delete a
bunch of things from it, and then see if that fixes it (in all of the 3 or
4 cases people have mentioned to me where this happens, this solved the
problem).
You can also verify the problem by typing
cd /home/gino/XTAL/SYN/V1/DASETs/Se3/SAD/REF/
csh AutoBuild_run_2_/TEMP0/RUN_FILE_1
which should bomb immediately in exactly the same way.
Please let me know if that doesn't fix it!
All the best,
Tom T
>> Hi Folks,
>> does anybody know what this means?
>> My AutoBuild dies off in the middle with this error message
>>
>> ********************************************************************************
>> Failed to carry out AutoBuild_build_cycle:
>>
>> child process stderr output:
>> command: 'csh
>> /home/gino/XTAL/SYN/V1/DASETs/Se3/SAD/REF/AutoBuild_run_2_/TEMP0/RUN_FILE_1'
>> Word too long.
>> ********************************************************************************
>>
>> Thanks,
>>
>> Gino
>>
>> ***********************************************************
>> Gino Cingolani, Ph.D.
>> Assistant Professor
>> Dept. of Biochemistry and Molecular Biology
>> SUNY Upstate Medical University
>> 750 E. Adams Street, Syracuse, NY, 13210
>> Tel. (315) 464 8744
>> Fax. (315) 464 8750
>> Email: cingolag at upstate.edu
>> ***********************************************************
>> "Nati non foste per viver come bruti, ma per seguir virtute e conoscenza"
>> ("You were not born to live like brutes, but to follow virtue and
>> knowledge")
>> Dante, The Divine Comedy (Inferno, XXVI, vv. 119-120)
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>>
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