[phenixbb] low resolution secondary structure refinement

Pavel Afonine PAfonine at lbl.gov
Wed Apr 7 16:48:34 PDT 2010


rigid body refinement does not employ any restraints. You can use 
secondary structure restraints in refinement of individual coordinates.

Actually, you can use secondary structure restraints in constrained 
rigid body refinement (SA in torsion angle space).

To use secondary structure restraints: 
"secondary_structure_restraints=true". phenix.refine GUI should have an 
option for this too.


On 4/7/10 4:38 PM, r n wrote:
> Hi
> I wanted to do low resolution rigid body refinement with secondary 
> structural restrain. I have not seen
> any command or information in the phenix document?
> any help
> Thanks
> ram****
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