[phenixbb] assert n_ncs > 0

Pavel Afonine PAfonine at lbl.gov
Fri Apr 9 14:08:38 PDT 2010


Hi Robert,

- are you running phenix.refine using GUI or command line?

- what is the exact command you used (if running from command line)?

- can you send the .log file?

So far I don't know where this error comes from... To say more I need 
more input from you.

Pavel.


On 4/9/10 2:00 PM, Robert Ng wrote:
> Hi again,
> How about this one ...
> Traceback (most recent call last):
>   File "/usr/local/phenix-1.6.1-348/phenix/phenix/command_line/refine.py",
> line 11, in <module>
>     command_line.run(command_name="phenix.refine", args=sys.argv[1:])
>   File "/usr/local/phenix-1.6.1-348/phenix/phenix/refinement/command_line.py",
> line 71, in run
>     overwrite = command_line_interpreter.command_line.options.overwrite)
>   File "/usr/local/phenix-1.6.1-348/phenix/phenix/refinement/driver.py",
> line 413, in __init__
>     self.process_ncs_restraint_groups()
>   File "/usr/local/phenix-1.6.1-348/phenix/phenix/refinement/driver.py",
> line 672, in process_ncs_restraint_groups
>     log = log)
>   File "/usr/local/phenix-1.6.1-348/cctbx_project/mmtbx/ncs/restraints.py",
> line 306, in from_atom_selections
>     log=log)
>   File "/usr/local/phenix-1.6.1-348/cctbx_project/mmtbx/ncs/restraints.py",
> line 219, in __init__
>     assert n_ncs > 0
> AssertionError
>
> Thanks again,
> Robert
> _______________________________________________
> phenixbb mailing list
> phenixbb at phenix-online.org
> http://phenix-online.org/mailman/listinfo/phenixbb
>   



More information about the phenixbb mailing list