[phenixbb] Optimization of the mask parameters in PHENIX

Pascal Egea pascal at msg.ucsf.edu
Sun Apr 11 16:20:34 PDT 2010


Dear All,

I am using the latest Phenix version (356) with the GUI and I would like to
see the effect of optimization of the mask parameters.
How can I do this with the GUI in the latest version ( I am also using the
secondary structure restraints)
in the manual I can see the command line
phenix.refine model.pdb data.mtz optimize_mask=true however I don't see such
option in the GUI (I can't see it  listed  in the whole list of commands)

Thanks in advance

-- 
Pascal F. Egea, PhD
Assistant Professor
UCLA, David Geffen School of Medicine
Department of Biological Chemistry
314 Biomedical Sciences Research Building
office (310)-983-3515
lab (310)-983-3516
email pegea at mednet.ucla.edu
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