[phenixbb] NCS problems using phenix GUI on a Mac

Nathaniel Echols nechols at lbl.gov
Wed Apr 28 11:16:14 PDT 2010

On Wed, Apr 28, 2010 at 11:06 AM, John Pascal
<John.Pascal at mail.jci.tju.edu>wrote:

> I am having difficulties defining NCS parameters using the GUI
> interface (Mac 10.4.11; phenix 1.6-289).

Please update to 1.6.1.  I think all of these problems have been fixed

> Phenix will automatically select NCS restraint groups and use them
> during refinement.  But if I edit the automated selections to my
> liking then click on Update and Save, the refinement runs with the
> original parameters unedited.  I have tried reading in a ncs.param
> file, but it does not get read during the refinement run.  Also, an
> intermittent problem with this GUI is that I am not allowed to "Add"
> a new restraint group.  When I click this button, it just clears out
> the selections on the last group, and does not add a new group.  Any
> ideas?

Intermittent how?  It doesn't happen with the current version, but it's
possible this was also fixed recently.

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