[phenixbb] installing phenix on Fedora core 10

amadrona at uci.edu amadrona at uci.edu
Wed Aug 4 16:56:26 PDT 2010

Thank you.  I can't believe how easy that was.  My phenix.maps problem is
solved.  It works as it should.  I was also having a problem in not
getting a pdb or mtz to export for wxc optimization (see below) so I will
rerun this tonight and hopefully everything will go smoothly.  Thanks



============================== Exporting results

Traceback (most recent call last):
  File "/usr/local/phenix-1.6-289/phenix/phenix/command_line/refine.py",
line 11, in <module>
    command_line.run(command_name="phenix.refine", args=sys.argv[1:])
line 97, in run
  File "/usr/local/phenix-1.6-289/phenix/phenix/refinement/driver.py",
line 903, in write_refined_pdb
    print >> self.log, "Writing refined structure to PDB file:\n  %s" %
  File "/usr/local/phenix-1.6-289/cctbx_project/libtbx/utils.py", line
666, in write
IOError: [Errno 5] Input/output error

> On Wed, Aug 4, 2010 at 3:37 PM, <amadrona at uci.edu> wrote:
>> Do you know the correct tar file for Fedora core 10?
>> When I enter "uname -r" in the command line I get:
>> I think this means I am running Fedora Core 10 but I don't see a .tar
>> file
>> for this to download.  Will another work?
> Usually, yes (we only very recently started building different 64-bit
> installers).  I'd recommend starting with the fc8 installer.
> -Nat
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