[phenixbb] phaser ep_sad zscore

Randy Read rjr27 at cam.ac.uk
Thu Dec 9 01:13:32 PST 2010


What you need is :

LLGCOMPLETE SIGMA <your desired Z-score>

See http://www.phaser.cimr.cam.ac.uk/index.php/Keywords#LLGCOMPLETE.



On 8 Dec 2010, at 23:21, Bryan Lepore wrote:

> On Wed, Dec 8, 2010 at 5:24 PM, Nathaniel Echols <nechols at lbl.gov> wrote:
>> I think this is only used for MR_AUTO mode, i.e. a cutoff for TFZ.
> and for ep_sad, it appears that Z=6.0 is the lowest score for a site.
> i take this to mean there is no way to drop the Z-score cutoff in ep_sad mode.
> -Bryan
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Randy J. Read
Department of Haematology, University of Cambridge
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