[phenixbb] coot - display map

r n ramme29 at yahoo.com
Tue Jan 5 14:50:33 PST 2010


Hi
>>. Does Coot have toolbar buttons labeled "Hydrogens on" and "Connected to Phenix" (or something very similar)?
No

2. What is the output of "coot --version"?

$coot --version
bin/coot-real --version
0.6 (revision 2540)  [with guile 1.8.7 embedded] [with python 2.6.0 embedded]

Thanks



________________________________

From: Nathaniel Echols <NEchols at lbl.gov>
To: PHENIX user mailing list <phenixbb at phenix-online.org>
Sent: Tue, January 5, 2010 4:39:38 PM
Subject: Re: [phenixbb] coot - display map

On Jan 5, 2010, at 2:34 PM, r n wrote:
> I am using Phenix GUI, after refinement , tried to load the coot interface in Phenix, it opens up
> the coot, but did not load the map or model file. I am using coot0.6 version, Is there any place in 
> phenix enviroment that I could mention the path for coot?

It is very likely that the build of Coot you are using is defective or incomplete (e.g. Python not included).  Two questions:


1. Does Coot have toolbar buttons labeled "Hydrogens on" and "Connected to Phenix" (or something very similar)?

2. What is the output of "coot --version"?

thanks,
Nat

-------------------
Nathaniel Echols
Lawrence Berkeley Lab
510-486-5136
NEchols at lbl.gov



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