[phenixbb] error on the latest phenix

Jian Wu protease at gmail.com
Tue Jul 20 03:55:11 PDT 2010


Hi Nathaniel,

The result of phenix.wxpython -c "import sys; print sys.path" is,

['', '/local/prog/phenix-1.6.2-432/phenix',
'/local/prog/phenix-1.6.2-432/cctbx_project',
'/local/prog/phenix-1.6.2-432', '/local/prog/phenix-1.6.2-432/docutils',
'/local/prog/phenix-1.6.2-432/phaser', '/local/prog/phenix-1.6.2-432/tntbx',
'/local/prog/phenix-1.6.2-432/reel', '/local/prog/phenix-1.6.2-432/elbow',
'/local/prog/phenix-1.6.2-432/PyQuante',
'/local/prog/phenix-1.6.2-432/PyCifRW',
'/local/prog/phenix-1.6.2-432/cctbx_project/boost_adaptbx',
'/local/prog/phenix-1.6.2-432/cctbx_project/libtbx/pythonpath',
'/local/prog/phenix-1.6.2-432/build/intel-linux-2.6/lib',
'/local/prog/ccp4/ccp4-6.1.3/share/python',
'/local/prog/phenix-1.6.2-432/build/intel-linux-2.6/base/lib/python26.zip',
'/local/prog/phenix-1.6.2-432/build/intel-linux-2.6/base/lib/python2.6',
'/local/prog/phenix-1.6.2-432/build/intel-linux-2.6/base/lib/python2.6/plat-linux2',
'/local/prog/phenix-1.6.2-432/build/intel-linux-2.6/base/lib/python2.6/lib-tk',
'/local/prog/phenix-1.6.2-432/build/intel-linux-2.6/base/lib/python2.6/lib-old',
'/local/prog/phenix-1.6.2-432/build/intel-linux-2.6/base/lib/python2.6/lib-dynload',
'/local/prog/phenix-1.6.2-432/build/intel-linux-2.6/base/lib/python2.6/site-packages',
'/local/prog/phenix-1.6.2-432/build/intel-linux-2.6/base/lib/python2.6/site-packages/Numeric',
'/local/prog/phenix-1.6.2-432/build/intel-linux-2.6/base/lib/python2.6/site-packages/PIL',
'/local/prog/phenix-1.6.2-432/build/intel-linux-2.6/base/lib/python2.6/site-packages/wx-2.8-gtk2-ansi']

The OS of my linux is CentOS5.4 and the kernel is 2.6.18-164.el5PAE.

Thanks,
Jian

On Tue, Jul 20, 2010 at 6:33 PM, Nathaniel Echols <nechols at lbl.gov> wrote:

> On Tue, Jul 20, 2010 at 6:09 AM, Jian Wu <protease at gmail.com> wrote:
>
>> Today, I download the latest version phenix-1.6.3-473 and everything is ok
>> during the installation. However, when I open the graphical phenix,
>> something wrong has happened showed as below:
>>
>> ImportError: No module named wx.lib.dialogs
>>
>> Any suggestions and comments will be appreciated.
>>
>
> There are several ways to run into this error; one reason is if another,
> older wxPython installation is "polluting" the environment.  This can happen
> if you've set the PYTHONPATH environment variable, or you've modified
> ~/.pythonrc to extend sys.path.  Could you please send me the output of this
> command?
>
> phenix.wxpython -c "import sys; print sys.path"
>
> It's also possible that the installation wasn't entirely successful, even
> though you didn't notice any error messages.  Which installer did you
> download, and which OS (including version) are you using?
>
> thanks,
> Nat
>
> _______________________________________________
> phenixbb mailing list
> phenixbb at phenix-online.org
> http://phenix-online.org/mailman/listinfo/phenixbb
>
>


-- 
Jian Wu

Ph.D.
Institute of Biochemistry and Cell Biology
Shanghai Institutes for Biological Sciences
Chinese Academy of Sciences (CAS)
Tel: 0086-21-54921217
Email: protease at gmail.com
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