[phenixbb] phenix.reduce segmentation fault with -trim option on Snow leopard Mac OSX

hari jayaram harijay at gmail.com
Thu Mar 4 20:13:15 PST 2010


Hi
I am running the phenix.reduce with the -trim option and getting a
segmentation fault with phenix version 1.6.289
I will remove the molprobity introduced hydrogens using pdbtools ..but
thought I will write in with this

Thanks
Hari


$ phenix.reduce s3-3_2.1_refmac0-coot-15_refmac0FH.pdb -trim >
s3-3_2.1_refmac0-coot-15_refmac0FnoH.pdb
reduce: version 3.15 11/6/2009, Copyright 1997-2009, J. Michael Word
Processing file: "s3-3_2.1_refmac0-coot-15_refmac0FH.pdb"
Segmentation fault
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