[phenixbb] changing TLS groups mid refinement

Pavel Afonine PAfonine at lbl.gov
Fri May 14 15:35:40 PDT 2010

Hi Bob,

phenix.refine does not use any data cutoff for refinement. What's 
reported in the record like this:

REMARK   3   MIN(FOBS/SIGMA_FOBS)              : 1.00

is what phenix.refine actually found in your data file. That is the 
minimal value of the ratio Fobs/Sigma(Fobs) among all the reflections is 

So you shouldn't worry about this.


On 5/14/10 3:04 PM, Robert Immormino wrote:
> Hi,
> I'm getting ready to deposit some models and they have different FOBS
> cutoffs.  I have been running PHENIX 1.6.1 (336) with the bare bones
> inputs.  I am wondering why there is an FOBS cutoff by default, and
> how that cutoff is determined?
> Thanks,
> -bob
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